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Error when using “read.gwt2nb” command to read in GWT file in R


Quickly reading very large tables as dataframesHow can I read command line parameters from an R script?R ggplot2 facetting - Error: No Layers in PlotRun R script from command liner test for a criteria in a column and if not met, move to next number and test againCalculating means with list data in Rconvert plenty of json objects into dataframe Rmemory issue plotting datatree /diagrammerError when test for spatial correlation with slmtest in spatial panel datasvm file handling in R






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0















I am a new R user, and I am having difficulty reading in a custom GWT spatial weights matrix I created in GeoDa. Specifically, I use the following code:



library(sphet)
nb.wts = read.gwt2dist("90km_distance.gwt", region.id=NULL)



"Warning messages: 1: In read.gwt2dist("90km_distance.gwt") :
region.id not named PID 2: In read.gwt2dist("90km_distance.gwt") :

1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20,
21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37,
38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54,
55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71,
72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88,
89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104,
105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118,
119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132,
133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146,
147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160,
161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174,
175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188,
189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202,
203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216,
217, 218, 219, 220, 221, 222 [... truncated] 3: In
read.gwt2dist("90km_distance.gwt") : 1, 2, 3, 4, 5, 6, 7, 8, 9, 10,
11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27,
28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44,
45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61,
62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95,
96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110,
111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124,
125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138,
139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152,
153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166,
167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180,
181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,
195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208,
209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222
[... truncated]"




listw.distance=nb2listw(nb.wts, style ="W")




"Error in nb2listw(nb.wts, style = "W") : Empty neighbour sets found"




To account for the "empty neighbor sets," I include zero.policy = TRUE and get the following:



listw.distance = nb2listw(nb.wts, style ="W", zero.policy=TRUE)



"Error in nb2listw(nb.wts, style = "W", zero.policy = TRUE) : No
valid observations"




I am new to Stack Overflow as well as R, so I apologize if my code/output is not very clear. Thank you in advance for the help!










share|improve this question






























    0















    I am a new R user, and I am having difficulty reading in a custom GWT spatial weights matrix I created in GeoDa. Specifically, I use the following code:



    library(sphet)
    nb.wts = read.gwt2dist("90km_distance.gwt", region.id=NULL)



    "Warning messages: 1: In read.gwt2dist("90km_distance.gwt") :
    region.id not named PID 2: In read.gwt2dist("90km_distance.gwt") :

    1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20,
    21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37,
    38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54,
    55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71,
    72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88,
    89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104,
    105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118,
    119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132,
    133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146,
    147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160,
    161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174,
    175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188,
    189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202,
    203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216,
    217, 218, 219, 220, 221, 222 [... truncated] 3: In
    read.gwt2dist("90km_distance.gwt") : 1, 2, 3, 4, 5, 6, 7, 8, 9, 10,
    11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27,
    28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44,
    45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61,
    62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
    79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95,
    96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110,
    111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124,
    125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138,
    139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152,
    153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166,
    167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180,
    181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,
    195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208,
    209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222
    [... truncated]"




    listw.distance=nb2listw(nb.wts, style ="W")




    "Error in nb2listw(nb.wts, style = "W") : Empty neighbour sets found"




    To account for the "empty neighbor sets," I include zero.policy = TRUE and get the following:



    listw.distance = nb2listw(nb.wts, style ="W", zero.policy=TRUE)



    "Error in nb2listw(nb.wts, style = "W", zero.policy = TRUE) : No
    valid observations"




    I am new to Stack Overflow as well as R, so I apologize if my code/output is not very clear. Thank you in advance for the help!










    share|improve this question


























      0












      0








      0








      I am a new R user, and I am having difficulty reading in a custom GWT spatial weights matrix I created in GeoDa. Specifically, I use the following code:



      library(sphet)
      nb.wts = read.gwt2dist("90km_distance.gwt", region.id=NULL)



      "Warning messages: 1: In read.gwt2dist("90km_distance.gwt") :
      region.id not named PID 2: In read.gwt2dist("90km_distance.gwt") :

      1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20,
      21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37,
      38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54,
      55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71,
      72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88,
      89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104,
      105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118,
      119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132,
      133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146,
      147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160,
      161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174,
      175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188,
      189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202,
      203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216,
      217, 218, 219, 220, 221, 222 [... truncated] 3: In
      read.gwt2dist("90km_distance.gwt") : 1, 2, 3, 4, 5, 6, 7, 8, 9, 10,
      11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27,
      28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44,
      45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61,
      62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
      79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95,
      96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110,
      111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124,
      125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138,
      139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152,
      153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166,
      167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180,
      181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,
      195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208,
      209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222
      [... truncated]"




      listw.distance=nb2listw(nb.wts, style ="W")




      "Error in nb2listw(nb.wts, style = "W") : Empty neighbour sets found"




      To account for the "empty neighbor sets," I include zero.policy = TRUE and get the following:



      listw.distance = nb2listw(nb.wts, style ="W", zero.policy=TRUE)



      "Error in nb2listw(nb.wts, style = "W", zero.policy = TRUE) : No
      valid observations"




      I am new to Stack Overflow as well as R, so I apologize if my code/output is not very clear. Thank you in advance for the help!










      share|improve this question
















      I am a new R user, and I am having difficulty reading in a custom GWT spatial weights matrix I created in GeoDa. Specifically, I use the following code:



      library(sphet)
      nb.wts = read.gwt2dist("90km_distance.gwt", region.id=NULL)



      "Warning messages: 1: In read.gwt2dist("90km_distance.gwt") :
      region.id not named PID 2: In read.gwt2dist("90km_distance.gwt") :

      1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20,
      21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37,
      38, 39, 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54,
      55, 56, 57, 58, 59, 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71,
      72, 73, 74, 75, 76, 77, 78, 79, 80, 81, 82, 83, 84, 85, 86, 87, 88,
      89, 90, 91, 92, 93, 94, 95, 96, 97, 98, 99, 100, 101, 102, 103, 104,
      105, 106, 107, 108, 109, 110, 111, 112, 113, 114, 115, 116, 117, 118,
      119, 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132,
      133, 134, 135, 136, 137, 138, 139, 140, 141, 142, 143, 144, 145, 146,
      147, 148, 149, 150, 151, 152, 153, 154, 155, 156, 157, 158, 159, 160,
      161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172, 173, 174,
      175, 176, 177, 178, 179, 180, 181, 182, 183, 184, 185, 186, 187, 188,
      189, 190, 191, 192, 193, 194, 195, 196, 197, 198, 199, 200, 201, 202,
      203, 204, 205, 206, 207, 208, 209, 210, 211, 212, 213, 214, 215, 216,
      217, 218, 219, 220, 221, 222 [... truncated] 3: In
      read.gwt2dist("90km_distance.gwt") : 1, 2, 3, 4, 5, 6, 7, 8, 9, 10,
      11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27,
      28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 41, 42, 43, 44,
      45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55, 56, 57, 58, 59, 60, 61,
      62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78,
      79, 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95,
      96, 97, 98, 99, 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110,
      111, 112, 113, 114, 115, 116, 117, 118, 119, 120, 121, 122, 123, 124,
      125, 126, 127, 128, 129, 130, 131, 132, 133, 134, 135, 136, 137, 138,
      139, 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152,
      153, 154, 155, 156, 157, 158, 159, 160, 161, 162, 163, 164, 165, 166,
      167, 168, 169, 170, 171, 172, 173, 174, 175, 176, 177, 178, 179, 180,
      181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192, 193, 194,
      195, 196, 197, 198, 199, 200, 201, 202, 203, 204, 205, 206, 207, 208,
      209, 210, 211, 212, 213, 214, 215, 216, 217, 218, 219, 220, 221, 222
      [... truncated]"




      listw.distance=nb2listw(nb.wts, style ="W")




      "Error in nb2listw(nb.wts, style = "W") : Empty neighbour sets found"




      To account for the "empty neighbor sets," I include zero.policy = TRUE and get the following:



      listw.distance = nb2listw(nb.wts, style ="W", zero.policy=TRUE)



      "Error in nb2listw(nb.wts, style = "W", zero.policy = TRUE) : No
      valid observations"




      I am new to Stack Overflow as well as R, so I apologize if my code/output is not very clear. Thank you in advance for the help!







      r spatial economics






      share|improve this question















      share|improve this question













      share|improve this question




      share|improve this question








      edited Mar 22 at 6:31









      jacky_learns_to_code

      5032721




      5032721










      asked Mar 22 at 0:33









      C.McKnightC.McKnight

      11




      11






















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