Isolate list of reactive data.frames in ShinyRemove rows with all or some NAs (missing values) in data.frameR shiny passing reactive to selectInput choicesRShiny - overly reactive outputUse a reactive dataframe in Shiny to predict(svm)R shiny isolate reactive data.frameR Creating Dynamic variables from group aggregated set of DataFramesHow to store reactive outputs values in a vector to be used in a function?R shiny modify a specific element in a reactive tableUsing a function with an reactive argument for generating a tablePopulate dynamic table in with predicted values in shiny R

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Isolate list of reactive data.frames in Shiny


Remove rows with all or some NAs (missing values) in data.frameR shiny passing reactive to selectInput choicesRShiny - overly reactive outputUse a reactive dataframe in Shiny to predict(svm)R shiny isolate reactive data.frameR Creating Dynamic variables from group aggregated set of DataFramesHow to store reactive outputs values in a vector to be used in a function?R shiny modify a specific element in a reactive tableUsing a function with an reactive argument for generating a tablePopulate dynamic table in with predicted values in shiny R






.everyoneloves__top-leaderboard:empty,.everyoneloves__mid-leaderboard:empty,.everyoneloves__bot-mid-leaderboard:empty height:90px;width:728px;box-sizing:border-box;








0















I'm using shiny to create a list of reactive data.frames that I want to pass into a function. The function works well with lists of non-reactive data.frames, but I cannot figure out how to either 1) isolate the list of reactive data.frames just before passing it into the function, or 2) pass it into the function and then isolate the data.frames inside the function. The output of this function will be downloaded from shiny app, not rendered to output.



non_reactive_df_list <- isolate(df_list()) #throws error because the list isn't reactive, just the dataframes (df_list[[i]]) are reactive

non_reactive_df_list <- map(df_list, isolate) #doesn't work, and even it if did, there is no trigger/actionButton


What I really want would be like ..



df_list <- eventIsolateListElements(input$actionButton, df_list) # where df_list contains reactive elements


I don't know how many dfs there will be in the list.



The function I'm using:



dfList2string <- function(dbList) 
string <- "**DataFrame String**"
for (i in seq_along(dbList))
string <- paste(string, names(dbList[i]), sep = 'nn')
sub_string <- paste(names(dbList[[i]]), collapse = ', ')
string <- paste(string, sub_string, sep = 'n')
for (j in seq(1:nrow(dbList[[i]])))
sub_string <- paste(dbList[[i]][j,], collapse = ', ' )
string <- paste(string, sub_string, sep = 'n')


return(string)



if you want a shiny app example, I made a small shiny app that describes what I want. I do not include the code that doesn't work because it just crashes (makes troubleshooting difficult)



 require(shiny)

#make list of two non-reactive dataframes
dfList <- list()
dfList$df1 <- data.frame(a = rnorm(5, 1),
b = rnorm(5, 1))
dfList$df2 <- data.frame(a = rnorm(5, 3),
b = rnorm(5, 3))

ui <- fluidPage(

fluidRow(
HTML('<h3>User Inputs</h3>'),
numericInput('dfmean1', 'select mean df1', value= 1), #user choose mean for df1
numericInput('dfmean2', 'select mean df2', value= 2), #user choose mean for df2
HTML('<h3>Reactive df1</h3>'),
tableOutput('reactive_table1'), #show reactive df1 table for clarity
HTML('<h3>Reactive df2</h3>'),
tableOutput('reactive_table2'), #show reactive df2 table for clarity
HTML('<h3>Button to trigger Isolation of reactive list of df1 and df2</h3>'),
actionButton('action', 'WriteToText'), #this button should trigger the conversion of reactive_dfList to text string
HTML('<h3>Example function output using normal list of non-reactive dfs </h3>'),
verbatimTextOutput('text_table') #this shows output of a function that converts non-reactive dfList to text string
)
)

server <- function(session, input, output)

#make list of two reactive dataframes
reactive_dfList <- list() #initiate list to contain the two reactive dfs 1 and 2

reactive_dfList$df1 <- reactive(
data.frame(a = rnorm(5, input$dfmean1),
b = rnorm(5, input$dfmean1))
)

reactive_dfList$df2 <- reactive(
data.frame(a = rnorm(5, input$dfmean2),
b = rnorm(5, input$dfmean2))
)

#view the tables of reactive dataframs for clarity
output$reactive_table1 <- renderTable( reactive_dfList$df1() )
output$reactive_table2 <- renderTable( reactive_dfList$df2() )

#function that converts list of dfs to a text string
dfList2string <- function(dbList)
string <- "**DataFrame String**"
for (i in seq_along(dbList))
string <- paste(string, names(dbList[i]), sep = 'nn')
sub_string <- paste(names(dbList[[i]]), collapse = ', ')
string <- paste(string, sub_string, sep = 'n')
for (j in seq(1:nrow(dbList[[i]])))
sub_string <- paste(dbList[[i]][j,], collapse = ', ' )
string <- paste(string, sub_string, sep = 'n')


return(string)


output$text_table <- renderText(
dfList2string(dfList)
)



shinyApp(ui, server)









share|improve this question






















  • shiny.rstudio.com/articles/debugging.html Maybe this can help you debug shiny app.

    – noob
    Mar 24 at 6:41











  • I don't understand what you want to achieve. Please share the code that crashes, I can try to debug. In general you just do isolate(reactiveVar()) and everything works.

    – Alexander Leow
    Mar 24 at 17:20











  • Thank you for your suggestions @AlexanderLeow, I will try isolate(reactiveVar(reactiveDF)) when I get back to the office. Maybe I could create actionButton dependency inside the call to isolate, since making the dependency outside the call to isolate will re-create reactivity.

    – NicoWheat
    Mar 28 at 19:40

















0















I'm using shiny to create a list of reactive data.frames that I want to pass into a function. The function works well with lists of non-reactive data.frames, but I cannot figure out how to either 1) isolate the list of reactive data.frames just before passing it into the function, or 2) pass it into the function and then isolate the data.frames inside the function. The output of this function will be downloaded from shiny app, not rendered to output.



non_reactive_df_list <- isolate(df_list()) #throws error because the list isn't reactive, just the dataframes (df_list[[i]]) are reactive

non_reactive_df_list <- map(df_list, isolate) #doesn't work, and even it if did, there is no trigger/actionButton


What I really want would be like ..



df_list <- eventIsolateListElements(input$actionButton, df_list) # where df_list contains reactive elements


I don't know how many dfs there will be in the list.



The function I'm using:



dfList2string <- function(dbList) 
string <- "**DataFrame String**"
for (i in seq_along(dbList))
string <- paste(string, names(dbList[i]), sep = 'nn')
sub_string <- paste(names(dbList[[i]]), collapse = ', ')
string <- paste(string, sub_string, sep = 'n')
for (j in seq(1:nrow(dbList[[i]])))
sub_string <- paste(dbList[[i]][j,], collapse = ', ' )
string <- paste(string, sub_string, sep = 'n')


return(string)



if you want a shiny app example, I made a small shiny app that describes what I want. I do not include the code that doesn't work because it just crashes (makes troubleshooting difficult)



 require(shiny)

#make list of two non-reactive dataframes
dfList <- list()
dfList$df1 <- data.frame(a = rnorm(5, 1),
b = rnorm(5, 1))
dfList$df2 <- data.frame(a = rnorm(5, 3),
b = rnorm(5, 3))

ui <- fluidPage(

fluidRow(
HTML('<h3>User Inputs</h3>'),
numericInput('dfmean1', 'select mean df1', value= 1), #user choose mean for df1
numericInput('dfmean2', 'select mean df2', value= 2), #user choose mean for df2
HTML('<h3>Reactive df1</h3>'),
tableOutput('reactive_table1'), #show reactive df1 table for clarity
HTML('<h3>Reactive df2</h3>'),
tableOutput('reactive_table2'), #show reactive df2 table for clarity
HTML('<h3>Button to trigger Isolation of reactive list of df1 and df2</h3>'),
actionButton('action', 'WriteToText'), #this button should trigger the conversion of reactive_dfList to text string
HTML('<h3>Example function output using normal list of non-reactive dfs </h3>'),
verbatimTextOutput('text_table') #this shows output of a function that converts non-reactive dfList to text string
)
)

server <- function(session, input, output)

#make list of two reactive dataframes
reactive_dfList <- list() #initiate list to contain the two reactive dfs 1 and 2

reactive_dfList$df1 <- reactive(
data.frame(a = rnorm(5, input$dfmean1),
b = rnorm(5, input$dfmean1))
)

reactive_dfList$df2 <- reactive(
data.frame(a = rnorm(5, input$dfmean2),
b = rnorm(5, input$dfmean2))
)

#view the tables of reactive dataframs for clarity
output$reactive_table1 <- renderTable( reactive_dfList$df1() )
output$reactive_table2 <- renderTable( reactive_dfList$df2() )

#function that converts list of dfs to a text string
dfList2string <- function(dbList)
string <- "**DataFrame String**"
for (i in seq_along(dbList))
string <- paste(string, names(dbList[i]), sep = 'nn')
sub_string <- paste(names(dbList[[i]]), collapse = ', ')
string <- paste(string, sub_string, sep = 'n')
for (j in seq(1:nrow(dbList[[i]])))
sub_string <- paste(dbList[[i]][j,], collapse = ', ' )
string <- paste(string, sub_string, sep = 'n')


return(string)


output$text_table <- renderText(
dfList2string(dfList)
)



shinyApp(ui, server)









share|improve this question






















  • shiny.rstudio.com/articles/debugging.html Maybe this can help you debug shiny app.

    – noob
    Mar 24 at 6:41











  • I don't understand what you want to achieve. Please share the code that crashes, I can try to debug. In general you just do isolate(reactiveVar()) and everything works.

    – Alexander Leow
    Mar 24 at 17:20











  • Thank you for your suggestions @AlexanderLeow, I will try isolate(reactiveVar(reactiveDF)) when I get back to the office. Maybe I could create actionButton dependency inside the call to isolate, since making the dependency outside the call to isolate will re-create reactivity.

    – NicoWheat
    Mar 28 at 19:40













0












0








0








I'm using shiny to create a list of reactive data.frames that I want to pass into a function. The function works well with lists of non-reactive data.frames, but I cannot figure out how to either 1) isolate the list of reactive data.frames just before passing it into the function, or 2) pass it into the function and then isolate the data.frames inside the function. The output of this function will be downloaded from shiny app, not rendered to output.



non_reactive_df_list <- isolate(df_list()) #throws error because the list isn't reactive, just the dataframes (df_list[[i]]) are reactive

non_reactive_df_list <- map(df_list, isolate) #doesn't work, and even it if did, there is no trigger/actionButton


What I really want would be like ..



df_list <- eventIsolateListElements(input$actionButton, df_list) # where df_list contains reactive elements


I don't know how many dfs there will be in the list.



The function I'm using:



dfList2string <- function(dbList) 
string <- "**DataFrame String**"
for (i in seq_along(dbList))
string <- paste(string, names(dbList[i]), sep = 'nn')
sub_string <- paste(names(dbList[[i]]), collapse = ', ')
string <- paste(string, sub_string, sep = 'n')
for (j in seq(1:nrow(dbList[[i]])))
sub_string <- paste(dbList[[i]][j,], collapse = ', ' )
string <- paste(string, sub_string, sep = 'n')


return(string)



if you want a shiny app example, I made a small shiny app that describes what I want. I do not include the code that doesn't work because it just crashes (makes troubleshooting difficult)



 require(shiny)

#make list of two non-reactive dataframes
dfList <- list()
dfList$df1 <- data.frame(a = rnorm(5, 1),
b = rnorm(5, 1))
dfList$df2 <- data.frame(a = rnorm(5, 3),
b = rnorm(5, 3))

ui <- fluidPage(

fluidRow(
HTML('<h3>User Inputs</h3>'),
numericInput('dfmean1', 'select mean df1', value= 1), #user choose mean for df1
numericInput('dfmean2', 'select mean df2', value= 2), #user choose mean for df2
HTML('<h3>Reactive df1</h3>'),
tableOutput('reactive_table1'), #show reactive df1 table for clarity
HTML('<h3>Reactive df2</h3>'),
tableOutput('reactive_table2'), #show reactive df2 table for clarity
HTML('<h3>Button to trigger Isolation of reactive list of df1 and df2</h3>'),
actionButton('action', 'WriteToText'), #this button should trigger the conversion of reactive_dfList to text string
HTML('<h3>Example function output using normal list of non-reactive dfs </h3>'),
verbatimTextOutput('text_table') #this shows output of a function that converts non-reactive dfList to text string
)
)

server <- function(session, input, output)

#make list of two reactive dataframes
reactive_dfList <- list() #initiate list to contain the two reactive dfs 1 and 2

reactive_dfList$df1 <- reactive(
data.frame(a = rnorm(5, input$dfmean1),
b = rnorm(5, input$dfmean1))
)

reactive_dfList$df2 <- reactive(
data.frame(a = rnorm(5, input$dfmean2),
b = rnorm(5, input$dfmean2))
)

#view the tables of reactive dataframs for clarity
output$reactive_table1 <- renderTable( reactive_dfList$df1() )
output$reactive_table2 <- renderTable( reactive_dfList$df2() )

#function that converts list of dfs to a text string
dfList2string <- function(dbList)
string <- "**DataFrame String**"
for (i in seq_along(dbList))
string <- paste(string, names(dbList[i]), sep = 'nn')
sub_string <- paste(names(dbList[[i]]), collapse = ', ')
string <- paste(string, sub_string, sep = 'n')
for (j in seq(1:nrow(dbList[[i]])))
sub_string <- paste(dbList[[i]][j,], collapse = ', ' )
string <- paste(string, sub_string, sep = 'n')


return(string)


output$text_table <- renderText(
dfList2string(dfList)
)



shinyApp(ui, server)









share|improve this question














I'm using shiny to create a list of reactive data.frames that I want to pass into a function. The function works well with lists of non-reactive data.frames, but I cannot figure out how to either 1) isolate the list of reactive data.frames just before passing it into the function, or 2) pass it into the function and then isolate the data.frames inside the function. The output of this function will be downloaded from shiny app, not rendered to output.



non_reactive_df_list <- isolate(df_list()) #throws error because the list isn't reactive, just the dataframes (df_list[[i]]) are reactive

non_reactive_df_list <- map(df_list, isolate) #doesn't work, and even it if did, there is no trigger/actionButton


What I really want would be like ..



df_list <- eventIsolateListElements(input$actionButton, df_list) # where df_list contains reactive elements


I don't know how many dfs there will be in the list.



The function I'm using:



dfList2string <- function(dbList) 
string <- "**DataFrame String**"
for (i in seq_along(dbList))
string <- paste(string, names(dbList[i]), sep = 'nn')
sub_string <- paste(names(dbList[[i]]), collapse = ', ')
string <- paste(string, sub_string, sep = 'n')
for (j in seq(1:nrow(dbList[[i]])))
sub_string <- paste(dbList[[i]][j,], collapse = ', ' )
string <- paste(string, sub_string, sep = 'n')


return(string)



if you want a shiny app example, I made a small shiny app that describes what I want. I do not include the code that doesn't work because it just crashes (makes troubleshooting difficult)



 require(shiny)

#make list of two non-reactive dataframes
dfList <- list()
dfList$df1 <- data.frame(a = rnorm(5, 1),
b = rnorm(5, 1))
dfList$df2 <- data.frame(a = rnorm(5, 3),
b = rnorm(5, 3))

ui <- fluidPage(

fluidRow(
HTML('<h3>User Inputs</h3>'),
numericInput('dfmean1', 'select mean df1', value= 1), #user choose mean for df1
numericInput('dfmean2', 'select mean df2', value= 2), #user choose mean for df2
HTML('<h3>Reactive df1</h3>'),
tableOutput('reactive_table1'), #show reactive df1 table for clarity
HTML('<h3>Reactive df2</h3>'),
tableOutput('reactive_table2'), #show reactive df2 table for clarity
HTML('<h3>Button to trigger Isolation of reactive list of df1 and df2</h3>'),
actionButton('action', 'WriteToText'), #this button should trigger the conversion of reactive_dfList to text string
HTML('<h3>Example function output using normal list of non-reactive dfs </h3>'),
verbatimTextOutput('text_table') #this shows output of a function that converts non-reactive dfList to text string
)
)

server <- function(session, input, output)

#make list of two reactive dataframes
reactive_dfList <- list() #initiate list to contain the two reactive dfs 1 and 2

reactive_dfList$df1 <- reactive(
data.frame(a = rnorm(5, input$dfmean1),
b = rnorm(5, input$dfmean1))
)

reactive_dfList$df2 <- reactive(
data.frame(a = rnorm(5, input$dfmean2),
b = rnorm(5, input$dfmean2))
)

#view the tables of reactive dataframs for clarity
output$reactive_table1 <- renderTable( reactive_dfList$df1() )
output$reactive_table2 <- renderTable( reactive_dfList$df2() )

#function that converts list of dfs to a text string
dfList2string <- function(dbList)
string <- "**DataFrame String**"
for (i in seq_along(dbList))
string <- paste(string, names(dbList[i]), sep = 'nn')
sub_string <- paste(names(dbList[[i]]), collapse = ', ')
string <- paste(string, sub_string, sep = 'n')
for (j in seq(1:nrow(dbList[[i]])))
sub_string <- paste(dbList[[i]][j,], collapse = ', ' )
string <- paste(string, sub_string, sep = 'n')


return(string)


output$text_table <- renderText(
dfList2string(dfList)
)



shinyApp(ui, server)






r shiny shiny-reactivity






share|improve this question













share|improve this question











share|improve this question




share|improve this question










asked Mar 24 at 5:28









NicoWheatNicoWheat

67688




67688












  • shiny.rstudio.com/articles/debugging.html Maybe this can help you debug shiny app.

    – noob
    Mar 24 at 6:41











  • I don't understand what you want to achieve. Please share the code that crashes, I can try to debug. In general you just do isolate(reactiveVar()) and everything works.

    – Alexander Leow
    Mar 24 at 17:20











  • Thank you for your suggestions @AlexanderLeow, I will try isolate(reactiveVar(reactiveDF)) when I get back to the office. Maybe I could create actionButton dependency inside the call to isolate, since making the dependency outside the call to isolate will re-create reactivity.

    – NicoWheat
    Mar 28 at 19:40

















  • shiny.rstudio.com/articles/debugging.html Maybe this can help you debug shiny app.

    – noob
    Mar 24 at 6:41











  • I don't understand what you want to achieve. Please share the code that crashes, I can try to debug. In general you just do isolate(reactiveVar()) and everything works.

    – Alexander Leow
    Mar 24 at 17:20











  • Thank you for your suggestions @AlexanderLeow, I will try isolate(reactiveVar(reactiveDF)) when I get back to the office. Maybe I could create actionButton dependency inside the call to isolate, since making the dependency outside the call to isolate will re-create reactivity.

    – NicoWheat
    Mar 28 at 19:40
















shiny.rstudio.com/articles/debugging.html Maybe this can help you debug shiny app.

– noob
Mar 24 at 6:41





shiny.rstudio.com/articles/debugging.html Maybe this can help you debug shiny app.

– noob
Mar 24 at 6:41













I don't understand what you want to achieve. Please share the code that crashes, I can try to debug. In general you just do isolate(reactiveVar()) and everything works.

– Alexander Leow
Mar 24 at 17:20





I don't understand what you want to achieve. Please share the code that crashes, I can try to debug. In general you just do isolate(reactiveVar()) and everything works.

– Alexander Leow
Mar 24 at 17:20













Thank you for your suggestions @AlexanderLeow, I will try isolate(reactiveVar(reactiveDF)) when I get back to the office. Maybe I could create actionButton dependency inside the call to isolate, since making the dependency outside the call to isolate will re-create reactivity.

– NicoWheat
Mar 28 at 19:40





Thank you for your suggestions @AlexanderLeow, I will try isolate(reactiveVar(reactiveDF)) when I get back to the office. Maybe I could create actionButton dependency inside the call to isolate, since making the dependency outside the call to isolate will re-create reactivity.

– NicoWheat
Mar 28 at 19:40












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